from herschelhelp_internal import git_version
print("This notebook was run with herschelhelp_internal version: \n{}".format(git_version()))
%matplotlib inline
#%config InlineBackend.figure_format = 'svg'
import matplotlib.pyplot as plt
plt.rc('figure', figsize=(10, 6))
plt.style.use('ggplot')
import locale
locale.setlocale(locale.LC_ALL, 'en_GB')
import os
import time
import itertools
from astropy.coordinates import SkyCoord
from astropy.table import Table
from astropy import units as u
from astropy import visualization as vis
import numpy as np
from matplotlib_venn import venn3
from herschelhelp_internal.masterlist import (nb_compare_mags, nb_ccplots, nb_histograms,
quick_checks, find_last_ml_suffix)
OUT_DIR = os.environ.get('OUT_DIR', "./data")
SUFFIX = find_last_ml_suffix()
#SUFFIX = "20171016"
master_catalogue_filename = "master_catalogue_xmm-lss_{}.fits".format(SUFFIX)
master_catalogue = Table.read("{}/{}".format(OUT_DIR, master_catalogue_filename))
print("Diagnostics done using: {}".format(master_catalogue_filename))
quick_checks(master_catalogue).show_in_notebook()
flag_obs = master_catalogue['flag_optnir_obs']
flag_det = master_catalogue['flag_optnir_det']
venn3(
[
np.sum(flag_obs == 4),
np.sum(flag_obs == 2),
np.sum(flag_obs == 6),
np.sum(flag_obs == 1),
np.sum(flag_obs == 5),
np.sum(flag_obs == 3),
np.sum(flag_obs == 7)
],
set_labels=('Optical', 'near-IR', 'mid-IR'),
subset_label_formatter=lambda x: "{}%".format(int(100*x/len(flag_obs)))
)
plt.title("Wavelength domain observations");
venn3(
[
np.sum(flag_det[flag_obs == 7] == 4),
np.sum(flag_det[flag_obs == 7] == 2),
np.sum(flag_det[flag_obs == 7] == 6),
np.sum(flag_det[flag_obs == 7] == 1),
np.sum(flag_det[flag_obs == 7] == 5),
np.sum(flag_det[flag_obs == 7] == 3),
np.sum(flag_det[flag_obs == 7] == 7)
],
set_labels=('mid-IR', 'near-IR', 'Optical'),
subset_label_formatter=lambda x: "{}%".format(int(100*x/np.sum(flag_det != 0)))
)
plt.title("Detection of the {} sources detected\n in any wavelength domains "
"(among {} sources)".format(
locale.format('%d', np.sum(flag_det != 0), grouping=True),
locale.format('%d', len(flag_det), grouping=True)));
The master list if composed of several catalogues containing magnitudes in similar filters on different instruments. We are comparing the magnitudes in these corresponding filters.
u_bands = ["Megacam u"]
g_bands = ["Megacam g", "SUPRIME g", "GPC1 g", "DECam g"]
r_bands = ["Megacam r", "SUPRIME r", "GPC1 r", "DECam r"]
i_bands = [ "SUPRIME i", "GPC1 i", ]
z_bands = ["Megacam z", "SUPRIME z", "GPC1 z", "DECam z", "VIRCAM z"]
y_bands = ["Megacam y", "SUPRIME y", "GPC1 y", "VIRCAM y"]
j_bands = [ "VIRCAM j", "UKIDSS j"]
h_bands = [ "VIRCAM h", "UKIDSS j"]
k_bands = [ "VIRCAM k", "UKIDSS j"]
We compare the histograms of the total aperture magnitudes of similar bands.
for bands in [u_bands, g_bands, r_bands, i_bands, z_bands, y_bands, j_bands, h_bands, k_bands]:
colnames = ["m_{}".format(band.replace(" ", "_").lower()) for band in bands]
nb_histograms(master_catalogue, colnames, bands)
We compare one to one each magnitude in similar bands.
for band_of_a_kind in [u_bands, g_bands, r_bands, i_bands, z_bands, y_bands, j_bands, h_bands, k_bands]:
for band1, band2 in itertools.combinations(band_of_a_kind, 2):
basecol1, basecol2 = band1.replace(" ", "_").lower(), band2.replace(" ", "_").lower()
col1, col2 = "m_ap_{}".format(basecol1), "m_ap_{}".format(basecol2)
nb_compare_mags(master_catalogue[col1], master_catalogue[col2],
labels=("{} (aperture)".format(band1), "{} (aperture)".format(band2)))
col1, col2 = "m_{}".format(basecol1), "m_{}".format(basecol2)
nb_compare_mags(master_catalogue[col1], master_catalogue[col2],
labels=("{} (total)".format(band1), "{} (total)".format(band2)))
Cross-match the master list to SDSS and 2MASS to compare its magnitudes to SDSS and 2MASS ones.
master_catalogue_coords = SkyCoord(master_catalogue['ra'], master_catalogue['dec'])
The catalogue is cross-matched to SDSS-DR13 withing 0.2 arcsecond.
We compare the u, g, r, i, and z magnitudes to those from SDSS using fiberMag
for the aperture magnitude and petroMag
for the total magnitude.
sdss = Table.read("../../dmu0/dmu0_SDSS-DR13/data/SDSS-DR13_XMM-LSS.fits")
sdss_coords = SkyCoord(sdss['ra'] * u.deg, sdss['dec'] * u.deg)
idx, d2d, _ = sdss_coords.match_to_catalog_sky(master_catalogue_coords)
mask = (d2d < 0.2 * u.arcsec)
sdss = sdss[mask]
ml_sdss_idx = idx[mask]
for band_of_a_kind in [u_bands, g_bands, r_bands, i_bands, z_bands]:
for band in band_of_a_kind:
sdss_mag_ap = sdss["fiberMag_{}".format(band[-1])]
master_cat_mag_ap = master_catalogue["m_ap_{}".format(band.replace(" ", "_").lower())][ml_sdss_idx]
nb_compare_mags(sdss_mag_ap, master_cat_mag_ap,
labels=("SDSS {} (fiberMag)".format(band[-1]), "{} (aperture)".format(band)))
sdss_mag_tot = sdss["petroMag_{}".format(band[-1])]
master_cat_mag_tot = master_catalogue["m_ap_{}".format(band.replace(" ", "_").lower())][ml_sdss_idx]
nb_compare_mags(sdss_mag_ap, master_cat_mag_ap,
labels=("SDSS {} (petroMag)".format(band[-1]), "{} (total)".format(band)))
The catalogue is cross-matched to 2MASS-PSC withing 0.2 arcsecond. We compare the UKIDSS total J and K magnitudes to those from 2MASS.
The 2MASS magnitudes are “Vega-like” and we have to convert them to AB magnitudes using the zero points provided on this page:
Band | Fν - 0 mag (Jy) |
---|---|
J | 1594 |
H | 1024 |
Ks | 666.7 |
In addition, UKIDSS uses a K band whereas 2MASS uses a Ks (“short”) band, this page give a correction to convert the K band in a Ks band with the formula:
$$K_{s(2MASS)} = K_{UKIRT} + 0.003 + 0.004 * (J−K)_{UKIRT}$$# The AB zero point is 3631 Jy
j_2mass_to_ab = 2.5 * np.log10(3631/1595)
k_2mass_to_ab = 2.5 * np.log10(3631/666.7)
twomass = Table.read("../../dmu0/dmu0_2MASS-point-sources/data/2MASS-PSC_XMM-LSS.fits")
twomass_coords = SkyCoord(twomass['raj2000'], twomass['dej2000'])
idx, d2d, _ = twomass_coords.match_to_catalog_sky(master_catalogue_coords)
mask = (d2d < 0.2 * u.arcsec)
twomass = twomass[mask]
ml_twomass_idx = idx[mask]
nb_compare_mags(twomass['jmag'] + j_2mass_to_ab, master_catalogue['m_ukidss_j'][ml_twomass_idx],
labels=("2MASS J", "UKIDSS J (total)"))
ukidss_ks_like = master_catalogue['m_ukidss_k'] + 0.003 + 0.004 * (
master_catalogue['m_ukidss_j'] - master_catalogue['m_ukidss_k'])
nb_compare_mags(twomass['kmag'] + k_2mass_to_ab, ukidss_ks_like[ml_twomass_idx],
labels=("2MASS Ks", "UKIDSS Ks-like (total)"))
nb_compare_mags(twomass['jmag'] + j_2mass_to_ab, master_catalogue['m_wirds_j'][ml_twomass_idx],
labels=("2MASS J", "WIRCAM J (total)"))
nb_compare_mags(twomass['kmag'] + k_2mass_to_ab, master_catalogue['m_wirds_ks'][ml_twomass_idx],
labels=("2MASS Ks", "WIRCAM Ks (total)"))
for band in r_bands:
nb_ccplots(
master_catalogue["m_{}".format(band.replace(" ", "_").lower())],
master_catalogue["m_ap_{}".format(band.replace(" ", "_").lower())] - master_catalogue["m_{}".format(band.replace(" ", "_").lower())],
band, "r aperture mag - total mag ({})".format(band),
master_catalogue["stellarity"],
invert_x=True
)
nb_ccplots(
master_catalogue['m_suprime_g'] - master_catalogue['m_suprime_i'],
master_catalogue['m_ukidss_j'] - master_catalogue['m_ukidss_k'],
"g - i (Suprime)", "J - K (UKIDSS)",
master_catalogue["stellarity"]
)
nb_ccplots(
master_catalogue['m_suprime_i'] - master_catalogue['m_irac_i1'],
master_catalogue['m_suprime_g'] - master_catalogue['m_suprime_i'],
"Suprime i - IRAC1", "g - i (Suprime)",
master_catalogue["stellarity"]
)
nb_ccplots(
master_catalogue['m_megacam_u'] - master_catalogue['m_megacam_g'],
master_catalogue['m_megacam_g'] - master_catalogue['m_megacam_r'],
"u - g (CFHT)", "g - r (CFHT)",
master_catalogue["stellarity"]
)
nb_ccplots(
master_catalogue['m_ukidss_j'] - master_catalogue['m_ukidss_k'],
master_catalogue['m_suprime_g'] - master_catalogue['m_ukidss_j'],
"J - K (UKIDSS)", "g - J (Suprime, UKIDSS)",
master_catalogue["stellarity"]
)
nb_ccplots(
master_catalogue['m_suprime_i'] - master_catalogue['m_suprime_z'],
master_catalogue['m_suprime_z'] - master_catalogue['m_ukidss_j'],
"i - z (Suprime)", "z - J (Suprime, UKIDSS)",
master_catalogue["stellarity"]
)
nb_ccplots(
master_catalogue['m_irac_i3'] - master_catalogue['m_irac_i4'],
master_catalogue['m_irac_i1'] - master_catalogue['m_irac_i2'],
"IRAC3 - IRAC4", "IRAC1 - IRAC2",
master_catalogue["stellarity"]
)